The DB-ALM Project

Rationale of the DB-ALM

The European Commission's Joint Research Centre has established the DB-ALM based on a legal requirement1,2. It was recognised that the readily access to suitable and adequately described (non-animal) methods is a prerequisite for their use within decision making processes by regulators for safety assessments or by any end-user in biomedical sciences.

The DB-ALM is a public service and available in its current form since October 2006 launched in occasion of the 15th anniversary of ECVAM, today the EU Reference Laboratory on Alternatives to Animal Testing (EURL ECVAM). The first version of an entirely revised DB-ALM was released in 2014 and completed in September 2016.

The initial establishment of the service was supervised by an international Advisory Board that included representatives of academia and independent National competence centres for alternative methods. The further progress has been monitored by the EURL ECVAM Scientific Advisory Committee (ESAC).

The DB-ALM provides ready-to-use information presented as evaluated data-sheets in the form of summary records and/or detailed information on various aspects of animal alternatives in the field of biomedical sciences and toxicology for research and regulatory purposes. The data sheets are compiled by experts in the field with current focus on non-animal methods for toxicological evaluations of chemicals and formulations, but not restricted to these applications only. Method descriptions can cover various approaches: mathematical models, cell and tissue culturing techniques, testing strategies and advanced in vitro methods for safety and efficacy testing of chemical and medicinal products. The target user groups are the Interational and National Authorities, Industry, Academia, the Animal Welfare Movement and the services of the European Commission.

The DB-ALM is indicated by the European Chemicals Agency as a useful source of information on in vitro methods for REACH registration purposes (REgistration, Authorisation and restriction of CHemicals, EC Regulation No. 1907/2006), which can be considered during information gap analysis or in a weight of evidence approach:

In December 2014, the OECD has adopted a Guidance Document n°211 for Describing Non-Guideline In Vitro Test Methods to facilitate their consideration in regulatory applications. Herein the DB-ALM is indicated as one of the publicly available repository/library of methods that may be helpful in dissemination of comprehensive method descriptions. The format of the Method Summary in DB-ALM is adopted accordingly to ensure the compliance with the new guidance for new or updated data sheets entered after January 2015.

The Data Content

Origin of information

The DB-ALM provides full method descriptions and related information on alternative approaches to animal experimentation in form of evaluated data sheets. The information originates from:

After the selection, evaluation and final assessment of the available information, which is summarised, brought into a logical context and finally compiled into comprehensive ready-for-use data sheet(s). Further details of this process are provided in the Workstrategy section.

Topic areas

The initial focus has been given to in vitro techniques for toxicology assessments of chemicals and/or formulations for regulatory purposes, however DB-ALM also includes descriptions of computational and experimental approaches used in:

Data sectors

The DB-ALM uses in-house (EURL ECVAM and other DG JRC services) competence and expertise in support to the definition and/or revision of the information content and collaborates with international experts in the respective fields of science for the definition of the individual data sheets addressing:

Topic Summaries

In Vitro / Advanced Approaches

Scientific Terminology and database classifications

Data compilation and retrieval procedures in the DB-ALM are based on the classification lists and controlled vocabularies maintained in-house, that cover:

Information retrieval

The DB-ALM provides users oriented information in the form of evaluated data sheets with the different levels of information content, but also different possibilities of information retrieval are offered: free text search, and guided search options. The DB-ALM information content is organised in a semi-structured manner and is classified based on its contents and concepts (e.g. topic concerned, level of assessments, category of model used including its level of biological organisation, biological endpoints and their measurements, status of development, or regulatory acceptance). Controlled vocabularies are used during the description of the methods to better reflect and consequently retrieve the information contained, a fundamental principle of today's scientific knowledge management.

The so called "faceted navigation" could consequently be applied to the DB-ALM allowing users to explore the collections of information and concepts from different points of view and to navigate the information along multiple paths with its individual search options in a more user friendly manner.

The DB-ALM revised version provides a refined data retrieval approach for the "method data sector" first offering a choice between two search strategies implemented with state-of-the-art search technology:

Free text search option

Guided search option

In contrast to the free text search option, the guided search offers modular interfaces that allow the user to add/remove search fields at any time of the data retrieval procedure. Using this progressive incremental query construction, users are able to formulate the equivalent of a sophisticated query by taking a series of small, simple steps. Also in this case, the auto-complete function can be used with the assistance of controlled vocabularies or freely chosen search terms can be entered by using wild cards and Boolean operators.

The following search fields (parameters) are available and can be used in any combination:

Terms from the classification lists: Topics, Models & Strategies and Status can be selected from a pre-defined drop-down list allowing for one or more terms to be combined. Queries including the Biological Endpoints and Measurements, Experimental Systems and Method Names are aided by the auto-complete function offering a choice of matching database records. When ignored and no search term is entered, the complete list of the database classification terms for the selected search parameter will be searched and linked data sheets retrieved.

Display of search results

Regardless of the search strategy used, the search results are displayed as an alphabetically-sorted list of the fields of application, including: the name/title, abstract, the link to the full data sheet (available as pdf document) and the links to the related database contents to the methods:

The Search Results display provides now more options on how the results are displayed:

  1. Results can be filtered on Methods or Protocols or both
  2. Results can be sorted by:
    • topic area
    • biological endpoint
    • experimental system used
    • area of concern, such as chemicals with different uses, vaccines etc.
    • Status of development, validation or regulatory acceptance
    • Method name

1 SEC(91)1794, Communication of the European Commission to Council and the European Parliament in October 1991, pointing to a requirement in Directive 86/609/EEC on the protection of animals used for experimental and other scientific purposes, OJ L No. 358, 18.12.1986.

2 Directive 2010/63/EU of the European Parliament and of the Council of 22 September 2010 on the protection of animals used for scientific purposes, Article 48, Annex VII (2)(d), OJ L Nr. 276/33, 20.10.2010.

Last page update: August 2016